ON THE INSIDE:

Peter V. Minorsky

On the Inside
Plant Physiol. 2006 140: 791-792. [Full Text] [PDF]  

BIOINFORMATICS:

Sander A. Peters, Jan C. van Haarst, Taco P. Jesse, Dennis Woltinge, Kim Jansen, Thamara Hesselink, Marjo J. van Staveren, Marleen H.C. Abma-Henkens, and René M. Klein-Lankhorst

TOPAAS, a Tomato and Potato Assembly Assistance System for Selection and Finishing of Bacterial Artificial Chromosomes
Plant Physiol. 2006 140: 805-817. [Abstract] [Full Text] [PDF] [Supplemental Data]  

Saranyan K. Palaniswamy, Stephen James, Hao Sun, Rebecca S. Lamb, Ramana V. Davuluri, and Erich Grotewold AGRIS and AtRegNet. A Platform to Link cis-Regulatory Elements and Transcription Factors into Regulatory Networks Plant Physiol. 2006 140: 818-829. [Abstract] [Full Text] [PDF] [Supplemental Data] OPEN ACCESS ARTICLE

GENOME ANALYSIS:

Frank Klimmek, Andreas Sjödin, Christos Noutsos, Dario Leister, and Stefan Jansson

Abundantly and Rarely Expressed Lhc Protein Genes Exhibit Distinct Regulation Patterns in Plants
Plant Physiol. 2006 140: 793-804. [Abstract] [Full Text] [PDF] [Supplemental Data]  

BIOCHEMICAL PROCESSES AND MACROMOLECULAR STRUCTURES:

Silvia Rubio, Tony R. Larson, Miguel Gonzalez-Guzman, Santiago Alejandro, Ian A. Graham, Ramón Serrano, and Pedro L. Rodriguez

An Arabidopsis Mutant Impaired in Coenzyme A Biosynthesis Is Sugar Dependent for Seedling Establishment
Plant Physiol. 2006 140: 830-843. First Published on January 13, 2006; 10.1104/pp.105.072066 [Abstract] [Full Text] [PDF]  

Stefan Lunkenbein, MariLuz Bellido, Asaph Aharoni, Elma M.J. Salentijn, Ralf Kaldenhoff, Heather A. Coiner, Juan Muñoz-Blanco, and Wilfried Schwab

Cinnamate Metabolism in Ripening Fruit. Characterization of a UDP-Glucose:Cinnamate Glucosyltransferase from Strawberry
Plant Physiol. 2006 140: 1047-1058. First Published on January 27, 2006; 10.1104/pp.105.074955 [Abstract] [Full Text] [PDF]  

Eloïse Dray, Nicolas Siaud, Emeline Dubois, and Marie-Pascale Doutriaux

Interaction between Arabidopsis Brca2 and Its Partners Rad51, Dmc1, and Dss1
Plant Physiol. 2006 140: 1059-1069. First Published on January 13, 2006; 10.1104/pp.105.075838 [Abstract] [Full Text] [PDF]  

Naoko Fujita, Mayumi Yoshida, Noriko Asakura, Takashi Ohdan, Akio Miyao, Hirohiko Hirochika, and Yasunori Nakamura

Function and Characterization of Starch Synthase I Using Mutants in Rice
Plant Physiol. 2006 140: 1070-1084. First Published on January 27, 2006; 10.1104/pp.105.071845 [Abstract] [Full Text] [PDF]  

CELL BIOLOGY AND SIGNAL TRANSDUCTION:

Katherine Mary Warpeha, Syed Salman Lateef, Yevgeniya Lapik, Marybeth Anderson, Bao-Shiang Lee, and Lon Seth Kaufman

G-Protein-Coupled Receptor 1, G-Protein G-Subunit 1, and Prephenate Dehydratase 1 Are Required for Blue Light-Induced Production of Phenylalanine in Etiolated Arabidopsis
Plant Physiol. 2006 140: 844-855. First Published on January 13, 2006; 10.1104/pp.105.071282 [Abstract] [Full Text] [PDF]  

Thomas J. Emborg, Joseph M. Walker, Bosl Noh, and Richard D. Vierstra

Multiple Heme Oxygenase Family Members Contribute to the Biosynthesis of the Phytochrome Chromophore in Arabidopsis
Plant Physiol. 2006 140: 856-868. First Published on January 20, 2006; 10.1104/pp.105.074211 [Abstract] [Full Text] [PDF]  

Qiao Zhao, Sara Leung, Anita H. Corbett, and Iris Meier

Identification and Characterization of the Arabidopsis Orthologs of Nuclear Transport Factor 2, the Nuclear Import Factor of Ran
Plant Physiol. 2006 140: 869-878. First Published on January 20, 2006; 10.1104/pp.105.075499 [Abstract] [Full Text] [PDF]  

Unni S. Lea, Marie-Thérèse Leydecker, Isabelle Quilleré, Christian Meyer, and Cathrine Lillo Posttranslational Regulation of Nitrate Reductase Strongly Affects the Levels of Free Amino Acids and Nitrate, whereas Transcriptional Regulation Has Only Minor Influence Plant Physiol. 2006 140: 1085-1094. First Published on February 3, 2006; 10.1104/pp.105.074633 [Abstract] [Full Text] [PDF] OPEN ACCESS ARTICLE

DEVELOPMENT AND HORMONE ACTION:

Lenin Sánchez-Calderón, José López-Bucio, Alejandra Chacón-López, Abel Gutiérrez-Ortega, Esmeralda Hernández-Abreu, and Luis Herrera-Estrella

Characterization of low phosphorus insensitive Mutants Reveals a Crosstalk between Low Phosphorus-Induced Determinate Root Development and the Activation of Genes Involved in the Adaptation of Arabidopsis to Phosphorus Deficiency
Plant Physiol. 2006 140: 879-889. First Published on January 27, 2006; 10.1104/pp.105.073825 [Abstract] [Full Text] [PDF]  

Silvia Ferrario, Anna V. Shchennikova, John Franken, Richard G.H. Immink, and Gerco C. Angenent

Control of Floral Meristem Determinacy in Petunia by MADS-Box Transcription Factors
Plant Physiol. 2006 140: 890-898. First Published on January 20, 2006; 10.1104/pp.105.072660 [Abstract] [Full Text] [PDF] [Supplemental Data]  

Jisheng Li, Xinhua Dai, and Yunde Zhao

A Role for Auxin Response Factor 19 in Auxin and Ethylene Signaling in Arabidopsis
Plant Physiol. 2006 140: 899-908. First Published on February 3, 2006; 10.1104/pp.105.070987 [Abstract] [Full Text] [PDF]  

Queenie K.-G. Tan and Vivian F. Irish

The Arabidopsis Zinc Finger-Homeodomain Genes Encode Proteins with Unique Biochemical Properties That Are Coordinately Expressed during Floral Development
Plant Physiol. 2006 140: 1095-1108. First Published on January 20, 2006; 10.1104/pp.105.070565 [Abstract] [Full Text] [PDF]  

Tesfamichael H. Kebrom, Byron L. Burson, and Scott A. Finlayson

Phytochrome B Represses Teosinte Branched1 Expression and Induces Sorghum Axillary Bud Outgrowth in Response to Light Signals
Plant Physiol. 2006 140: 1109-1117. First Published on January 27, 2006; 10.1104/pp.105.074856 [Abstract] [Full Text] [PDF]  

Keni Jiang, Tracy Ballinger, Daisy Li, Shibo Zhang, and Lewis Feldman

A Role for Mitochondria in the Establishment and Maintenance of the Maize Root Quiescent Center
Plant Physiol. 2006 140: 1118-1125. First Published on January 27, 2006; 10.1104/pp.105.071977 [Abstract] [Full Text] [PDF]  

ENVIRONMENTAL STRESS AND ADAPTATION TO STRESS:

Tony Remans, Philippe Nacry, Marjorie Pervent, Thomas Girin, Pascal Tillard, Marc Lepetit, and Alain Gojon

A Central Role for the Nitrate Transporter NRT2.1 in the Integrated Morphological and Physiological Responses of the Root System to Nitrogen Limitation in Arabidopsis
Plant Physiol. 2006 140: 909-921. First Published on January 13, 2006; 10.1104/pp.105.075721 [Abstract] [Full Text] [PDF]  

Do-Young Kim, Lucien Bovet, Sergei Kushnir, Eun Woon Noh, Enrico Martinoia, and Youngsook Lee

AtATM3 Is Involved in Heavy Metal Resistance in Arabidopsis
Plant Physiol. 2006 140: 922-932. First Published on February 3, 2006; 10.1104/pp.105.074146 [Abstract] [Full Text] [PDF]  

GENETICS, GENOMICS, AND MOLECULAR EVOLUTION:

Éva Kevei, Péter Gyula, Anthony Hall, László Kozma-Bognár, Woe-Yeon Kim, Maria E. Eriksson, Réka Tóth, Shigeru Hanano, Balázs Fehér, Megan M. Southern, Ruth M. Bastow, András Viczián, Victoria Hibberd, Seth J. Davis, David E. Somers, Ferenc Nagy, and Andrew J. Millar

Forward Genetic Analysis of the Circadian Clock Separates the Multiple Functions of ZEITLUPE
Plant Physiol. 2006 140: 933-945. First Published on January 20, 2006; 10.1104/pp.105.074864 [Abstract] [Full Text] [PDF] [Supplemental Data]  

Jane Geisler-Lee, Matt Geisler, Pedro M. Coutinho, Bo Segerman, Nobuyuki Nishikubo, Junko Takahashi, Henrik Aspeborg, Soraya Djerbi, Emma Master, Sara Andersson-Gunnerås, Björn Sundberg, Stanislaw Karpinski, Tuula T. Teeri, Leszek A. Kleczkowski, Bernard Henrissat, and Ewa J. Mellerowicz

Poplar Carbohydrate-Active Enzymes. Gene Identification and Expression Analyses
Plant Physiol. 2006 140: 946-962. First Published on January 13, 2006; 10.1104/pp.105.072652 [Abstract] [Full Text] [PDF] [Supplemental Data]  

Gustavo Gualtieri, Joann A. Conner, Daryl T. Morishige, L. David Moore, John E. Mullet, and Peggy Ozias-Akins

A Segment of the Apospory-Specific Genomic Region Is Highly Microsyntenic Not Only between the Apomicts Pennisetum squamulatum and Buffelgrass, But Also with a Rice Chromosome 11 Centromeric-Proximal Genomic Region
Plant Physiol. 2006 140: 963-971. First Published on January 13, 2006; 10.1104/pp.105.073809 [Abstract] [Full Text] [PDF] [Supplemental Data]  

Kewei Zhang, Qian Qian, Zejun Huang, Yiqin Wang, Ming Li, Lilan Hong, Dali Zeng, Minghong Gu, Chengcai Chu, and Zhukuan Cheng

GOLD HULL AND INTERNODE2 Encodes a Primarily Multifunctional Cinnamyl-Alcohol Dehydrogenase in Rice
Plant Physiol. 2006 140: 972-983. First Published on January 27, 2006; 10.1104/pp.105.073007 [Abstract] [Full Text] [PDF]  

A. Jimmy Ytterberg, Jean-Benoit Peltier, and Klaas J. van Wijk

Protein Profiling of Plastoglobules in Chloroplasts and Chromoplasts. A Surprising Site for Differential Accumulation of Metabolic Enzymes
Plant Physiol. 2006 140: 984-997. First Published on February 3, 2006; 10.1104/pp.105.076083 [Abstract] [Full Text] [PDF] [Supplemental Data]  

Xinli Sun, Yinglong Cao, and Shiping Wang

Point Mutations with Positive Selection Were a Major Force during the Evolution of a Receptor-Kinase Resistance Gene Family of Rice
Plant Physiol. 2006 140: 998-1008. First Published on February 3, 2006; 10.1104/pp.105.073080 [Abstract] [Full Text] [PDF] [Supplemental Data]  

PLANTS INTERACTING WITH OTHER ORGANISMS:

Ashley Byun-McKay, Kimberley-Ann Godard, Morteza Toudefallah, Diane M. Martin, Rene Alfaro, John King, Joerg Bohlmann, and Aine L. Plant

Wound-Induced Terpene Synthase Gene Expression in Sitka Spruce That Exhibit Resistance or Susceptibility to Attack by the White Pine Weevil
Plant Physiol. 2006 140: 1009-1021. First Published on January 13, 2006; 10.1104/pp.105.071803 [Abstract] [Full Text] [PDF] [Supplemental Data]  

Massimo E. Maffei, Axel Mithöfer, Gen-Ichiro Arimura, Hannes Uchtenhagen, Simone Bossi, Cinzia M. Bertea, Laura Starvaggi Cucuzza, Mara Novero, Veronica Volpe, Stefano Quadro, and Wilhelm Boland

Effects of Feeding Spodoptera littoralis on Lima Bean Leaves. III. Membrane Depolarization and Involvement of Hydrogen Peroxide
Plant Physiol. 2006 140: 1022-1035. First Published on January 27, 2006; 10.1104/pp.105.071993 [Abstract] [Full Text] [PDF]  

Yonggen Lou and Ian T. Baldwin

Silencing of a Germin-Like Gene in Nicotiana attenuata Improves Performance of Native Herbivores
Plant Physiol. 2006 140: 1126-1136. First Published on February 3, 2006; 10.1104/pp.105.073700 [Abstract] [Full Text] [PDF] [Supplemental Data]  

SYSTEMS BIOLOGY, MOLECULAR BIOLOGY, AND GENE REGULATION:

Mamoru Okamoto, Anshuman Kumar, Wenbin Li, Ye Wang, M. Yaeesh Siddiqi, Nigel M. Crawford, and Anthony D.M. Glass

High-Affinity Nitrate Transport in Roots of Arabidopsis Depends on Expression of the NAR2-Like Gene AtNRT3.1
Plant Physiol. 2006 140: 1036-1046. First Published on January 13, 2006; 10.1104/pp.105.074385 [Abstract] [Full Text] [PDF]  

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