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Plant Physiol, September 2000, Vol. 124, pp. 95-104
Analysis of the Expression of CLA1, a Gene That
Encodes the 1-Deoxyxylulose 5-Phosphate Synthase of the
2-C-Methyl-D-Erythritol-4-Phosphate Pathway in
Arabidopsis1
Juan M.
Estévez,
Araceli
Cantero,
Cynthia
Romero,
Hiroshi
Kawaide,
Luis F.
Jiménez,
Tomohisa
Kuzuyama,
Haruo
Seto,
Yuji
Kamiya, and
Patricia
León*
Departamento de Biología Molecular de Plantas, Instituto de
Biotecnología, Universidad Nacional Autónoma de
México, Avenida Universidad 2001 Chamilpa, Apdo Postal 510-3
Cuernavaca Morelos 62271, México (J.M.E., A.C., C.R., P.L.);
Frontier Research Program, Institute of Physical and Chemical Research
(RIKEN), Hirosawa 2-1, Wako-shi, Saitama, 351-0198, Japan (H.K.,
Y.K.); Laboratorio de Microscopía Electrónica, Facultad
de Ciencias, Universidad Nacional Autónoma de México,
México (L.F.J.); and Institute of Molecular and Cellular
Biosciences, University of Tokyo, Bunkyo-ku, Tokyo 113-0032, Japan
(T.K., H.S.)
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ABSTRACT |
The discovery of the
2-C-methyl-D-erythritol-4-phosphate pathway
for the biosynthesis of isoprenoids raises the important question of
the nature and regulation of the enzymes involved in this pathway.
CLA1, a gene previously isolated from Arabidopsis, encodes the first enzyme of the
2-C-methyl-D-erythritol-4-phosphate pathway,
1-deoxy-D-xylulose-5-phosphate synthase. We demonstrate this enzyme activity by complementation of the cla1-1
mutant phenotype and by direct enzymatic assays. Based on mRNA and
protein expression patterns this enzyme is expressed mainly in
developing photosynthetic and non-photosynthetic tissues. The
-glucuronidase expression pattern driven from the
CLA1 gene regulatory region supports the northern and
protein data while also showing that this gene has some level of
expression in most tissues of the plant. A mutation in the
CLA1 gene interferes with the normal development of
chloroplasts and etioplasts, but does not seem to affect amyloplast
structure. Microscopic analysis also shows a pleiotropic effect of the
CLA1 gene mutation in mesophyll tissue formation.
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INTRODUCTION |
In higher plants isoprenoids are
derived from isopentenyl diphosphate (IPP) and synthesized in at least
two different compartments, the cytoplasm and the chloroplast. For a
long time it was assumed that IPP was synthesized exclusively by the
mevalonate pathway in all organisms (Spurgeon and Porter, 1981 ;
Goldstein and Brown, 1990 ). However, independent studies have
demonstrated that in eubacteria, green algae, and plants, IPP is also
synthesized by a non-mevalonate pathway designated as the
2-C-methyl-D-erythritol-4-P (MEP)
pathway (for review, see Rohmer, 1998 , 1999 ; Lichtenthaler, 1999 ). Thus
in plants cytosolic IPP is synthesized by the mevalonate pathway and
plastidic IPP is synthesized by the MEP pathway (Lichtenthaler, 1999 ). In the MEP pathway IPP is synthesized from pyruvate and glyceraldehyde-3-P via novel intermediates (Rohmer et al., 1993 ; Eisenreich et al., 1996 ; Schwender et al., 1996 ; Lichtenthaler et al.,
1997 ). Labeling and nuclear magnetic resonance studies showed
that 1-deoxyxylulose 5-P (DXP) is the first intermediate in this
pathway (Roh-mer et al., 1996 ; Arigoni et al., 1997 ). Genes
encoding for the first enzyme in this pathway, DXP synthase, were
isolated from several organisms and the enzymatic activity of their
encoded proteins has been corroborated (Sprenger et al., 1997 ; Bouvier et al., 1998 ; Lange et al., 1998 ; Lois et al., 1998 ; Lichtenthaler, 1999 ). In addition to its role in IPP synthesis the DXP
synthase in plants, as in Escherichia coli, seems also to be
required for the synthesis of thiamin and pyridoxol (Julliard and
Douce, 1991 ; Hill et al., 1996 ). The next gene involved in the MEP
pathway has been isolated from E. coli, peppermint, and Arabidopsis (Takahashi et al., 1998 ; Lange and Croteau, 1999 ; Schwender
et al., 1999 ). It encodes an enzyme that converts DXP to MEP
(Takahashi et al., 1998 ). Finally a third intermediate product has
been recently postulated, as 4-(cytidine-
5'-diphospho)-2-C-methyl-D-erythritol. This product is synthesized from MEP by an enzyme encoded by the ygbP gene from E. coli (Rohdich et al., 1999 ).
Independently of this study we have proved that the latter intermediate
is essential for the formation of IPP (Kuzuyama et al., 2000a ).
The production of specific chloroplastic isoprenoids such as
carotenoids and phytol has now been demonstrated to depend on the MEP
pathway (Eisenreich et al., 1996 ; Arigoni et al., 1997 ; Knöss et
al., 1997 ; Lichtenthaler et al., 1997 ; Zeidler et al., 1997 ). Thus the
analysis of the regulation of the enzymes in the MEP pathway is
important in understanding the biosynthesis and possible manipulation
of such terpenoids in plants. The isolation of albino plant mutants in
Arabidopsis resulted in the identification of a gene required for the
synthesis of both chlorophyll and carotenoids, named CLA1
(Mandel et al., 1996 ). In the cla1-1 mutant plastid development is impaired at an early stage resulting in almost no
thylakoid membrane proliferation; the plastids resemble an early
proplastid stage. CLA1 is a single gene in the
Arabidopsis genome and its disruption affects the expression of both
nuclear- and chloroplast-encoded photosynthetic genes (Mandel et al.,
1996 ). The CLA1 protein sequence has extensive identity with
other reported DXP synthases.
In this report we demonstrate that the CLA1 gene encodes a
functional DXP synthase. To understand the regulation of this gene, we
performed a detailed analysis of the CLA1 gene mRNA
expression and protein patterns. We show that the CLA1
gene transcripts and protein preferentially accumulate in young
developing tissues. The microscopic analysis of different plastids in
the cla1-1 mutant demonstrates that the disruption of the
CLA1 gene affects the morphology of chloroplasts and
etioplasts and alters the final stages of cellular morphogenesis in
mesophyll tissue formation.
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RESULTS |
The Albino Phenotype of the cla1-1 Plant Can Be Rescued
by the Addition of 1-Deoxy-D-Xylulose (DX)
The extensive amino acid similarity of the CLA1 gene to
the published DXP synthases (Sprenger et al., 1997 ; Bouvier et
al., 1998 ; Lange et al., 1998 ; Lois et al., 1998 ; Lichtenthaler, 1999 ) suggested that the CLA1 gene could encode a DXP
synthase. To test whether the CLA1 protein functions as a DXP synthase
we took advantage of the albino phenotype in the cla1-1
mutant. Synthetic DX, a non-phosphorylated version of the product of
the DXP synthase, was supplemented on the growth medium of
cla1-1 plants. This product was used to ensure penetration
into the plant cells, as it was demonstrated to be efficiently
incorporated into plastidic isoprenoids (Arigoni et al., 1997 ; Zeidler
et al., 1997 ). As the cla1-1 mutation is lethal on soil,
seed stocks are maintained as heterozygotes. Upon selfing, one-quarter
of the progeny are albino on medium. After germination, such albino
homozygous mutant plants were selected and transferred to plates
containing 0.02% (w/v) DX. The development of these plants was
assessed by visual inspection and their pigment content was quantified.
As shown in Figure 1, the first true
leaves of the cla1-1 plants grown in germination media (GM)
media developed the albino phenotype characteristic of this mutant
(Fig. 1, A, right side and D). In contrast, cla1-1 plants
grown on the same media supplemented with DX turned green (Fig. 1, A
[middle plant] and C). For comparison, a Wassilewskija (WS) wild-type
plant grown in GM media is shown in the left side of Figure 1, A and B. This green phenotype correlates with a substantial increase in
chlorophyll and carotenoid content of the cla1-1 plants
supplemented with DX compared with the ones grown in GM media (Table
I). Greening observed in the leaves of
the cla1-1 plants supplemented with DX is specific for this mutant, as other unrelated albino plants such as alb1-1 and
alb2 1 (van der Veen and Blankenstijn de Vries, 1973 ;
Relichova, 1976 ) remain albino (data not shown). The cla1-1
cotyledons have the capacity to respond to DX, but only upon direct
exposure to this chemical during seed imbibition. We noticed however
that DX at the concentration used in these experiments (0.02%) has a
toxic effect in the early stages of development, as we detected
yellowish seedlings in cla1-1 and wild-type plants when this
compound was present during germination (data not shown).

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Figure 1.
In vivo complementation of the albino phenotype in
the cla1-1 seedlings by DX. A, Phenotypic analysis of
10-d-old seedlings of wild type grown on GM medium (left);
cla1-1 grown on GM medium supplemented with 0.02% (w/v) of
DX (center); and cla1-1 grown on GM medium (right). The
arrow indicates the first pair of leaves on the DX supplemented mutant
plant, where a green phenotype is clearly visible. An upper view is
shown for a wild-type plant grown on GM medium (B), a 15-d-old
cla1-1 seedling grown on GM medium supplemented with 0.02%
(w/v) DX (C) in which the two pairs of true leaves can be seen, and a
15-d-old cla1-1 seedling grown on GM medium (D).
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Table I.
Pigment quantification
Pigments were extracted from 15-d-old plants grown in GM or GM
supplemented during 10 d with 0.02% DX.
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The biochemical function of the recombinant CLA1 protein was also
examined in vitro. The GST-CLA1 fusion protein expressed in E. coli was used to test for DXP synthase activity. The product obtained after incubation of pyruvate and glyceraldehyde-3-P with the
CLA1 protein was treated with alkaline phosphatase and its identity was
analyzed by gas chromatography-mass spectrometry (GC-MS) as the
trimethylsilylated derivative. As shown in Table II the product obtained from this
reaction were determined to be DX and are in agreement with the
previously reported for peppermint DXP synthase (Lange et al.,
1998 ).
Tissue- and Organ-Specific Expression of the CLA1 Gene
in Arabidopsis
Although considerable information has been accumulated recently on
the MEP pathway in plants, the expression pattern and regulation of the
enzymes participating in this pathway are presently unknown. We decided
to study the CLA1 gene expression pattern at the mRNA and
protein levels. The RNA-blot hybridization data presented in Figure
2A demonstrate that the CLA1
mRNA is detected in all tissues examined, including non-photosynthetic
tissues such as roots. CLA1 gene transcripts are especially
abundant in seedlings (Fig. 2A, lanes 1 and 7) and in flower buds
compared with the other organs analyzed (Fig. 2A, lane 5).

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Figure 2.
Analysis of CLA1 gene transcript and
protein accumulation in Arabidopsis plants. A, RNA-blot analysis of the
CLA1 transcript. Five micrograms of total RNA was purified
from 15-d-old wild-type seedlings (lane 1), cla1-1 plants
(lane 2), and different tissues of wild-type plants including mature
leaves (lane 3), cauline leaves (lane 4), buds (lane 5), roots (lane
6), and 5-d-old seedlings (lane 7). The probes used were
CLA1 and RBCS, as well as rRNA as an RNA-loading
control as indicated in the left side of the panel. B, CLA1 protein
accumulation in different tissues. Western-blot analyses were performed
using total protein extracts obtained from 15-d-old cla1-1
seedlings (lane 1), 15-d-old wild-type seedlings (lane 2), young
rosette leaves (lane 3), mature rosette leaves (lane 4), roots (lane
5), 24-h-imbibed seeds (lane 6), flowers (lane 7), and immature
siliques (lane 8). Fifteen micrograms of total protein extracts was
loaded in each lane except for roots and seeds, where 30 and 45 µg
was used, respectively. C, CLA1 protein developmental expression.
Western-blot analysis shows CLA1 protein accumulation in 15-d-old
cla1-1 seedlings (lane 1), 5-d-old (lane 2), 8-d-old (lane
3), 15-d-old (lane 4), 20-d-old (lane 5), and 25-d-old (lane 6)
wild-type seedlings. In each lane, 15 µg of total protein was
loaded.
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To obtain more insight into the participation of this gene in
Arabidopsis development we investigated its expression pattern using a
-glucuronidase (GUS) reporter gene construct. A 1.4-kb upstream
region from the CLA1 gene initiation codon was used to generate a translational fusion with the GUS reporter gene
uidA. Eight independent transgenic plants from the
T2 generation were analyzed for GUS expression.
Although some variation in the intensity of staining was observed among
the lines carrying this construct, all of them showed the same GUS
staining pattern. According to the pattern observed the CLA1
gene is expressed very early in germinating seeds. As shown in Figure
3A, GUS activity was detected in the
protruding root (with the exception of the root cap) 48 h after
water imbibition. In 3-d-old seedlings (Fig. 3B), GUS is detected
primarily in the hypocotyl and in the emerging cotyledons with faint
staining in the root. In 5-d-old seedlings, GUS activity is detected in
most of the plant, the cotyledons, the hypocotyl, and the root (Fig.
3C). In older seedlings, GUS staining is especially strong in the
expanding leaves, including vascular tissue and trichomes (Fig. 3D),
but a faint staining in the hypocotyl and root is also present. A
transverse section of the inflorescence showed GUS activity in most of
the cells: in the epidermis, including the trichomes, and in the
cortex, vascular tissue, and pith (Fig. 3F). In the silique, GUS
staining is observed in the locules and in the funiculus, but there is
no expression detected in immature seeds (Fig. 3E). In the flower, GUS
staining is intense in the sepals and the stamens (Fig. 3G), whereas in
the petals, GUS activity is faint. Within carpels, staining is mostly
restricted to the upper part of the stigma and in the stigmatic
papillae (Fig. 3, G and H).

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Figure 3.
Histochemical analyses of GUS activity in
Arabidopsis plants expressing the GUS gene under the control of the
CLA1 gene promoter. A, Water-imbibed (48-h)
germinating seeds; B, 3-d-old seedlings; C, 5-d-old seedlings; D,
15-d-old seedlings; E, immature seeds and siliques from Arabidopsis; F,
transverse section of the inflorescence; G, fully developed Arabidopsis
flower; and H, individual stigma and anthers from a fully developed
Arabidopsis flower.
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Based on these two analyses we can conclude that the CLA1
gene is widely expressed throughout the Arabidopsis plant and that higher expression levels are found in the young tissues of the plant.
Characterization of the CLA1 Protein
To characterize the CLA1 gene product we performed
western-blot analysis using polyclonal antibodies raised against a
fusion protein between an E. coli glutathione
S-transferase (GST) and most of the CLA1 protein. We
detected a 70-kD protein in total extracts of 15-d-old wild-type
seedlings (Fig. 2B, lane 2) that is not detected in extracts from
cla1-1 plants (Fig. 2B, lane 1). The accumulation pattern of
the CLA1 protein was analyzed in total protein extracts from different
Arabidopsis tissues. As shown in Figure 2B, the CLA1 protein is
detected in most plant tissues except in 24-h-water-imbibed seeds (Fig.
2B, lane 6). CLA1 is particularly abundant in young leaves, in
buds, and in immature siliques, but barely detectable in roots. These
results contrast with the northern and transgenic plant analyses in
which the CLA1 gene is expressed at similar levels in both
roots and mature leaves (Fig. 2A, lanes 3 and 6). The CLA1 protein
accumulates most predominately in the young tissues of the plant (Fig.
2B, lanes 3 versus 4). When we compared the levels of CLA1 protein in
extracts from seedlings of different ages we found that this protein
increases as organs mature, reaching a maximum in 15-d-old plantlets as
shown in Figure 2C, lane 4. After this stage the amount of CLA1 protein
decreases in relation to the age of the plant (Fig. 2C).
Organelle and Tissue Morphology in the cla1-1
Plant
Our initial analysis demonstrated that the CLA1 protein in
Arabidopsis is required for normal chloroplast differentiation (Mandel
et al., 1996 ). Based on the CLA1 function and its mRNA and protein
expression patterns we decided to re-analyze the structure of other
plastid types in cla1-1 plants. Using transmission electron microscopy the morphology of etioplasts from the cotyledons of dark-adapted cla1-1 seedlings was analyzed. As
cla1-1 seed stocks are heterozygous, seeds were initially
germinated on Murashige and Skoog basal salt mixture media with light
for 6 d and the albino homozygous mutant plants were transferred
and kept in the dark during an additional 8 d. The same treatment
was followed with wild-type plants to be used as controls. As shown in
Figure 4B, the ultrastructure of the
dark-adapted etioplasts in cla1-1 plant is altered in
comparison with wild-type plastids (Fig. 4A). The prolamellar body in
these organelles is absent and vesicles are present which seem to be
associated with internal membranes. We also investigated the amyloplast
structure in 10-d-old roots of the cla1-1 plant. It is
interesting that as shown in Figure 4D, the morphology of this
organelle does not seem to be altered compared with wild-type plants.
Normal starch granules, characteristic of this plastid type, can be
detected in the plastids of both wild-type and mutant plants.

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Figure 4.
Microscopic analysis of the plastids and
mesophyll tissue of the cla1-1 mutant. Transmission electron
microscopic examination of plastids of wild-type (A and C) and
cla1-1 (B and D) seedlings. Etioplasts were analyzed
from cotyledons of seedlings that were dark-adapted for 4 d of
wild type (A) and homozygous (B) cla1-1 mutants. Amyloplasts
were analyzed from 10-d-old root seedlings of wild type (C) and
cla1-1 (D) mutant. Transverse sections of the 10-d-old first
leaf from plants of wild type (E), cla1-1 (F), and
cla1-1 (G) mutant supplemented with 0.02% (w/v) DX.
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A well-known event during leaf differentiation in dicot plants is the
coordination with chloroplast development (Chory, 1992 ). Mutants have
been isolated that partially uncouple such coordination, demonstrating
that these processes can be separable (Mochizuki et al., 1996 ). We
therefore asked if mutations in CLA1 have an effect on leaf
cellular morphology. As shown in Figure 4F, the transverse leaf section
of the cla1-1 plant shows an anomalous development of the
mesophyll tissue compared with similar sectors from a wild-type plant
(Fig. 4E). The proportion of air space compared with the mesophyll
tissue is larger in the cla1-1 mutant than in the wild-type
plant. Also for the cla1-1 mutant, the cells of the
mesophyll tissue remain round and small; few palisade cells are
present. This phenotype is unlikely to be the result of carbon or
vitamin (thiamin or pyridoxol) deficiency as these are supplemented in
the medium. The morphological abnormalities are reversible as soon as
the plastid proceeds through its differentiation pathway. When
cla1-1 plants are grown on Murashige and Skoog basal salt mixture media supplemented with DX they show a seminormal morphology of
the mesophyll tissue including the presence of palisade cells (Fig.
4G).
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DISCUSSION |
In this report we demonstrate that the CLA1 gene
encodes the previously reported DXP synthase (Sprenger et al., 1997 ;
Bouvier et al., 1998 ; Disch et al., 1998 ; Lange et al., 1998 ; Lois et al., 1998 ; Lichtenthaler, 1999 ). Early work by Arigioni and coworkers (1997) showed that DX is an effective compound for phytol and carotenoid production in culture cells of Catharantus
roseus. We also observed that DX has a striking capacity to
restore pigment biosynthesis in the cla1-1 albino mutant. DX
was efficiently absorbed by the root and transported into the leaves.
It is still an open question whether DX is phosphorylated before it is
converted to MEP.
The existence of two biosynthetic pathways for IPP production raises
questions about the participation of each pathway in the synthesis of
specific isoprenoid compounds and inter-pathway communication. Some
exchange between the cytoplasmic and chloroplastic IPP pools has been
suggested (Bach and Lichtenthaler, 1982 ; Arigoni et al., 1997 ; Nabeta
et al., 1997 ). It is interesting that despite the albino phenotype of
cla1-1 plants, low chlorophyll and carotenoid levels are
detectable in this mutant (Table I). As this seems to be a null
mutation, our interpretation is that cytosolic IPP probably moves into
the plastids, resulting in limited pigment levels. However, this supply
of cytosolic IPP is far too small to fulfill normal pigment
biosynthesis requirements. Whether the supply of cytosolic IPP could be
sufficient for the biosynthesis of other chloroplastic isoprenoids
under specific physiological or developmental conditions needs to be defined.
This work is the first detailed characterization of DXP synthase
expression patterns in plants. The CLA1 gene is widely
expressed in photosynthetic and non-photosynthetic tissues and its
expression is clearly modulated throughout plant development. The
maximum mRNA levels of CLA1 correlate with the maturation stage of the leaves when there are massive requirements for chlorophylls and carotenoids. In non-photosynthetic tissues the CLA1 expression pattern
supports the participation of the MEP pathway in the production of a
variety of isoprenoids. It is interesting to note that even though
substantial CLA1 mRNA levels were detected in roots by northern analysis and GUS staining of transgenic plants, the CLA1 protein levels in roots extracts were barely detectable. A potential post-transcriptional regulation mechanism for the CLA1
transcript might be operating in roots.
We demonstrated previously that CLA1 is required for proper chloroplast
development (Mandel et al., 1996 ). The data presented here further
substantiate the requirement for CLA1 to ensure development of
etioplasts, but CLA1 does not seem to be required for amyloplast differentiation. It is apparent that expression of the CLA1
gene is not required for starch accumulation because the size and
number of starch granules in the amyloplasts is similar in
cla1-1 and wild-type plants. We have observed that the
mesophyll tissue of cla1-1 is altered in comparison with
wild-type plants. Similar phenotypes have been reported in other
mutants that affect chloroplast development at an early stage such as
Dcl-m and GHOST in tomato, Dag in
Antirrhinum (Scolnik et al., 1987 ; Chatterjee et al., 1996 ; Keddie et al., 1996 ), and PAC and ATD in
Arabidopsis (Reiter et al., 1994 ; van der Graaff, 1997 ). The common
denominator in all is that the plastids are arrested early in
development. One possibility is that early arrest interferes with
production of a chloroplast signal to the cytoplasm and nucleus that
directly influences the last stages of mesophyll differentiation (Susek
and Chory, 1992 ; León et al., 1998 ).
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MATERIALS AND METHODS |
Plant Material and Growth Conditions
Arabidopsis ecotypes Columbia or WS seeds were grown in Metromix
200 (Grace Sierra, Milpitas, CA) in controlled growth chambers at
24°C using a 16-h light/8-h dark photoperiod with cool-white illumination (20 µE m 2 s 1) for 3 to 4 weeks. Plants under sterile conditions were grown in Murashige and
Skoog basal salt mixture supplemented with Gamborg's vitamins, 0.5%
(w/v) MES [2-(N-morpholino)ethanesulfonic acid], 1%
(w/v) Suc (GM media), and 0.7% (w/v) of phytoagar in the case of solid
medium. Determination of total carotenoids and chlorophylls was
conducted following the protocol reported by Lichtenthaler and Wellburn
(1983) .
In Vivo Complementation of the cla1-1 Albino
Phenotype
The recessive albino cla1-1 mutant is lethal on
soil (Mandel et al., 1996 ), thus seed stocks are maintained as
heterozygotes. The cla1-1 heterozygous plants were
germinated in GM media for 6 d. Homozygous albino
cla1-1 plants were transferred to GM medium or GM
supplemented with 0.02% (w/v) DX. As a control, WS wild-type plants
were incubated in the same type of media.
Molecular Biology Techniques
Total RNA was isolated from different plant tissues using the
procedure of Logemann et al. (1987) with minor modifications. For
northern blots, RNA was fractionated by electrophoresis in 1.2% (w/v)
agarose gels and transferred onto Hybond N+ nylon membranes
(Amersham Corporation, Arlington Heights, IL). Hybridizations and
washes were done at high stringency conditions according to standard
procedures using 32P-radiolabeled probes (Church and
Gilbert, 1984 ).
Production of the GST-CLA1 Fusion Protein and Antibody
Preparation
To generate a fusion protein containing the CLA1
gene, a 2-Kb SspI-EcoRI fragment of the
CLA1 cDNA was cloned downstream of the GST from the
pGEX1 vector (Amersham Pharmacia Biotech, Buckinghamshire, UK). This
fragment contains most of the CLA1 coding region with the exception of 197 bp of the putative chloroplast transit peptide. The generated plasmid, pGEX-CLA1, codes for the GST-CLA1
fusion protein without the putative chloroplast transit peptide. The integrity of the chimeric gene was verified by direct sequencing. The
isopropylthio- -D-galactoside-induced GST-CLA1 fusion
protein was produced in Escherichia coli and purified by
affinity chromatography using Glutathione Sepharose 4B resin (Amersham
Pharmacia Biotech) according to the protocol published (Ausubel
et al., 1989 ). For polyclonal antibody generation, purified
GST-CLA1 protein (10 µg in 20 µL of phosphate-buffered
saline) and complete Freund's adjuvant was injected
intraperitoneal as 1:9 emulsion in a BALB/c mice (Harlow and Lane,
1988 ). Three additional injections (10 µg each), were administrated
every 8 d starting 14 d after the initial injection. The
ascites was collected 8 d later and titer was determined. In
addition to recognizing the 70-kD CLA1 protein, this ascites fluid
recognizes one abundant protein that is also present in the
cla1-1 mutant plant.
Functional Assay of CLA1 Protein
DXP synthase activity was measured using 50 µg of the purified
GST-CLA1 fusion protein. The reaction was done according to Kuzuyama et
al. (2000b) , in 100 mM Tris
[tris(hydroxymethyl)aminomethane]-HCL (pH 8.0), 1 mM
MgCl2, 2 mM dithiothreitol, 0.075 mM thiamine diphosphate, 20 mM
glyceraldehyde-3-P, and 10 mM pyruvate at 37°C for 1 h and terminated by heating. Denatured proteins were removed by
centrifugation at 15,000 rpm for 10 min. The supernatant was treated
with 1 unit of bacterial alkaline phosphatase at 50°C for 1 h.
The reaction mixture was treated with activated charcoal power and
filtered. The filtrate was subject to HPLC-connected Shodex SUGAR
KS-801 column (8 × 300 mm, SHOWA DENKO, Tokyo) heated at 80°C.
The flow rate of water was 1 mL min 1. DX was detected at
8.6 min of refractive index detector. For comparison, authentic DX was
detected at 8.5 min under the same condition consistent with that
previously reported by Lange, et al. (1998) .
To determine the product generated by the GST-CLA1 fusion
protein, eluates after HPLC separation were collected, dried, and then
derivatized with N,O bis(trimethylsilyl)
acetamide:trimethylchlorosilane:N-trimethylsilyimidazole (2:3:2, v/v) in pyridine at 80°C for 20 min. GC-MS analysis was performed by using Finnigan MAT GCQ ion-trap GC-MS system (Thermoquest, San Jose, CA) equipped with a 30-m × 0.25-mm diameter fused
silica capillary column coated with 0.25-µm film thickness of DB-5MS (J&W Scientific, Folson, CA). The oven temperature was programmed from
90°C (2-min hold) at 20°C min 1 to 150°C, at 10°C
min 1 to 250°C, and then at 30°C min 1 to
300°C with a constant velocity at 40 cm min 1 He.
Western-Blot Analysis
Protein samples were quantified with Bradford reagent (Bio-Rad,
Hercules, CA). Samples were separated by PAGE. To verify equal protein
loading a parallel gel was run and stained with Coomassie Brilliant
Blue R-250. The proteins were transferred onto nitrocellulose (Hybond
C, Amersham Pharmacia Biotech) by electroblotting for 1 h at 200 mA in 25 mM Tris, 0.2 M Gly, and 20% (w/v)
methanol. Immunodetection was done using a 1:1,000 dilution of the
GST-CLA1 fusion protein polyclonal antibody. An antimouse
immunoglobulin horseradish peroxidase-conjugate was used as a secondary
antibody (Amersham Pharmacia Biotech), and detection was done with an
enhanced chemiluminescence detection kit (Amersham Pharmacia Biotech).
Plasmid Construction
A CLA1-GUS translational fusion was constructed using a 1.4-kb
fragment of the CLA1 5'-regulatory region (contained in
the ESSA I FCA contig fragment no. 4, accession no. Z97339).
Initially, a fragment of approximately 9 kb capable of complementing
the cla1-1 mutant phenotype (Mandel et al., 1996 ) was
subcloned into the pBluescript II vector and subjected to Exonuclease
III/Mung Bean deletions. One of such deletions, containing
approximately 1.4 kb upstream of the ATG codon from the
CLA1 gene was PCR-amplified and used for expression
analysis. The primers used for the PCR were: ATG-Nco
(5'GCAGAAGAAGCCATGGGAGGTAC3') that includes the
CLA1 ATG codon, and BS-Hind
(5'GGCCAAGCTTACGCCAAGCGCGCAAT3') fromthe
flanking vector sequence, plus a HindIII site at its end. The PCR fragment generated was first cloned as a translational fusion into a vector derived from pBluescript II KS( ) plasmids (Stratagene, La Jolla, CA) containing the uidA (GUS)
gene followed by the nopaline synthase 3' terminator from the pBin19
plasmid (Bevan, 1984 ), termed pBlueGUS. The entire fragment
(CLA1 promoter:GUS and nopaline synthase-3') was
subcloned into the binary vector pBin19 (Bevan, 1984 ) generating the
pBin/1458-G plasmid that was used for transformation into Arabidopsis.
Plant Transformation and Histochemical Analysis
Transgenic lines (Columbia) were constructed using
Agrobacterium tumefaciens-mediated transformation by the
vacuum infiltration method (Bechtold et al., 1993 ). Transgenic plants
were identified by their capacity to develop roots and maintain green
leaves in the presence of 50 µg mL 1 of kanamycin. They
were then transferred to soil to get the transgenic seed and the
following generations. GUS histochemical analysis was carried out
according to a protocol previously described (Jefferson, 1987 ). The
tissue was incubated at 37°C overnight (12 h). Destaining was
accomplished by 30 min incubations with 3:1 (v/v) acetone:methanol solution. Whole tissues or sections were observed under bright-field microscopy (Type 104, Nikon, Tokyo).
Microscopy Techniques
For transmission electron microscopy, tissues were fixed with
6% (w/v) glutaraldehyde in phosphate-buffered saline (pH 7.2) for
10 h and post-fixed in 1% (w/v) osmium tetroxide in the same buffer for several hours. After dehydration in a graded series of
ethanol and propylene oxide, samples were embedded in Epoxy resin. For
electron microscopy, 60-nm thin sections were obtained and mounted on
formvar-coated copper grids (Electron Microscopy Science, Fort
Washington, PA). For contrast, 3% (w/v) uranyl acetate and 0.3% (w/v)
lead citrate were used. Grids were observed with a transmission
electron microscope (EM-10, Carl Zeiss, Jena, Germany) operating at 80 kV. For light microscopy, samples were treated as described above and
0.5-µm semi-thin sections were obtained. The sections were stained
with 1% (w/v) toluidine blue and observed in bright field with a light
microscope (Standard, Carl Zeiss).
 |
ACKNOWLEDGMENTS |
We want to thank Elizabeth Mata and Carlos González for
their help in raising antibody and Paul Gaitan and Eugenio López for the synthesis of oligos. We thank Drs. Virginia Walbot, Analilia Arroyo, Helena Porta, Marcela Treviño, and Stuart Reichler for helpful comments on the manuscript.
 |
FOOTNOTES |
Received January 5, 2000; accepted May 9, 2000.
1
This work was funded by Consejo Nacional de
Ciencia y Tecnologia and Dirección General de Asuntos para el
Personal Académico (grant nos. 110P-N9506 and IN205697) and by
the Pew Charitable Trust.
*
Corresponding author; e-mail patricia{at}ibt.unam.mx; fax
52-73-139988.
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